Version History

1.1.3 (2014/08/22)

*New release for PyPi with bug fixes

1.1.2b (2014/08/05)

New Features

  • Added support for latest GATK version
  • Added GATK Group Variant Calling pipeline
  • Added noncoding RNA HTseq module

Bug Fixes

  • AMI memory handling
  • Fixed Sumatra parameters file handling
  • RNAseq count based pipeline produces single report for all samples

1.1.0 (2014/07/09)

First public release!

1.0.16 (2014/07/01)

New Features

  • Added Sumatra for logging of each run to Sumatra database
  • Added reading samples from a text file
  • Added AWS distribution and docs

Bug Fixes

  • Import modules for sumatra and hgapi

1.0.15 (2014/06/20)

New Features

  • Added TCGA download support